End of Day was off by ~3K for Thursday / Friday
I opened the end of day reports for the days in question, and scrolled down to the part in the report that states Total-In, Payouts/Charges etc. From there under Deposits I took the total Deposit (Which was $9438.31) and subtracted the Total In from the Over/Short Section (because they should match). That ended up being the exact same amount that was Over/Short. I then went in and did the same thing for The next day and we found the hypothesis to be true. At that point, I compared to the known good report (April, 5th) in that report the Total Deposit and the Total In matched so there was no Over/Short.